Martijho-PathNet-search-plots
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Three different diversity calculations have been performed, which resulted in three similar diversity messures: | Three different diversity calculations have been performed, which resulted in three similar diversity messures: | ||
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- | | [[File:Average_population_diversity_pairwise_hamming.png|300px|thumb|upright|alt=Hamming distance|Pairwise Hamming distance | + | | [[File:Average_population_diversity_pairwise_hamming.png|300px|thumb|upright|alt=Hamming distance|Pairwise Hamming distance: Calculated for each layer and then averaged across each path. This plot took 22 minutes and 40 seconds to generate.]] |
- | | [[File:Average_population_diversity_homemade.png|thumb|300px|upright|alt=Homemade distance|This diversity metric resulted in a scaled version of Pairwise Hamming, but took only 36 seconds to generate. See description below]] | + | | [[File:Average_population_diversity_homemade.png|thumb|300px|upright|alt=Homemade distance|Homemade diversity metric: This diversity metric resulted in a scaled version of Pairwise Hamming, but took only 36 seconds to generate. See description below]] |
- | | [[File:Average_population_diversity_euclidean_centroid.png|thumb|300px|alt=Euclidean distance|Calculated by averaging the euclidean distance between every genotype in a generation, and a "centroid genotype". The plot was generated in 40 seconds]] | + | | [[File:Average_population_diversity_euclidean_centroid.png|thumb|300px|alt=Euclidean distance|Average euclidean distance to centroid: Calculated by averaging the euclidean distance between every genotype in a generation, and a "centroid genotype". The plot was generated in 40 seconds]] |
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Revision as of 16:03, 28 February 2018
Contents |
Population Diversity
Diversity metrics
Three different diversity calculations have been performed, which resulted in three similar diversity messures: